BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008A08SP1|AL425796
(795 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1804 1573 0.0
>3x_Contig1804
Length = 51183
Score = 1573 bits (793), Expect = 0.0
Identities = 794/795 (99%)
Strand = Plus / Minus
Query: 1 ccaaaccggcccattcacctaattgcttggcatcagcaaccttgattaatggaacgttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40614 ccaaaccggcccattcacctaattgcttggcatcagcaaccttgattaatggaacgttgt 40555
Query: 61 tttcagtggccaaaccttggaccaacttgctgatggcttcttcagtaaccgattcaacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40554 tttcagtggccaaaccttggaccaacttgctgatggcttcttcagtaaccgattcaacca 40495
Query: 121 aaacagctagttgaccttcacctctggtcaaagccttggcagattctctcaaacctctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40494 aaacagctagttgaccttcacctctggtcaaagccttggcagattctctcaaacctctgg 40435
Query: 181 ccaaaccatcgtgaaccaaagaggttctcaagacgacctttagggcatcttcgatggtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40434 ccaaaccatcgtgaaccaaagaggttctcaagacgacctttagggcatcttcgatggtca 40375
Query: 241 attcagcgactgggacttgttggacttcttcaacgtcagacatttctaatttgataaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40374 attcagcgactgggacttgttggacttcttcaacgtcagacatttctaatttgataaaat 40315
Query: 301 tttctaaagtattgacttcttcgacagtggtactgctccgtgaagactttagaataacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40314 tttctaaagtattgacttcttcgacagtggtactgctccgtgaagactttagaataacat 40255
Query: 361 aaaactaaaaacatactaaactaataagaagaccatccgaaacgttttattcaatactct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40254 aaaactaaaaacatactaaactaataagaagaccatccgaaacgttttattcaatactct 40195
Query: 421 tcaacatattagcttaaatcatgggaattcaaaatataaagcttccaccattcaccgtga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40194 tcaacatattagcttaaatcatgggaattcaaaatataaagcttccaccattcaccgtga 40135
Query: 481 aaaataactttaaggtttagcgcactatatacgttcaacacttaagatatttcagaatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40134 aaaataactttaaggtttagcgcactatatacgttcaacacttaagatatttcagaatca 40075
Query: 541 acagacgacagcggagggcagaacaactgcgtccttttctttcgctgtaatgtccaggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40074 acagacgacagcggagggcagaacaactgcgtccttttctttcgctgtaatgtccaggtg 40015
Query: 601 ttttcgtgaacatttttcttaagactagtccgtggtggcgcgtactatgttgacgtgtag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40014 ttttcgtgaacatttttcttaagactagtccgtggtggcgcgtactatgttgacgtgtag 39955
Query: 661 atgccatatttggaaattctttagttttcttcagatttgaggaggattttggaatatgta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39954 atgccatatttggaaattctttagttttcttcagatttgaggaggattttggaatatgta 39895
Query: 721 cgggtgcaaacaaatatgacagtyactggtattttaatcttgttcaagtcttttcattaa 780
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 39894 cgggtgcaaacaaatatgacagtcactggtattttaatcttgttcaagtcttttcattaa 39835
Query: 781 gattagaagtgatga 795
|||||||||||||||
Sbjct: 39834 gattagaagtgatga 39820
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6243
Number of Sequences: 1807
Number of extensions: 6243
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 795
length of database: 10,358,551
effective HSP length: 16
effective length of query: 779
effective length of database: 10,329,639
effective search space: 8046788781
effective search space used: 8046788781
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)